Data Quality: Reproducibility


Replicate Concordance

Correlation measures of center

Human

mean: 0.9549 median: 0.9751

Mouse

mean: 0.9312 median: 0.9390
Organism Cell Type SPOT (rep 1) SPOT (rep 2) Replicates Correlation [R]
Human A549 (Human Lung Carcinoma Epithelial Cells) 0.4376 0.4086 2 0.9486
Human AG04449 (Fetal Buttock/Thigh Fibroblast) 0.4617 0.3886 2 0.9649
Human AG04450 (Fetal Lung Fibroblast) 0.4644 0.4019 2 0.9829
Human AG09309 (Adult Toe Fibroblast) 0.6948 0.4092 2 0.9388
Human AG09319 (Adult Gingival Fibroblast) 0.6695 0.4703 2 0.9895
Human AG10803 (Adult Abdomen Fibroblast) 0.7472 0.7097 2 0.9867
Human AoAF (Normal Human Aortic Adventitial Fibroblast Cells) 0.7162 0.6824 2 0.9892
Human BE2_C (Human Brain Neuroblastoma Cells) 0.6139 0.5567 2 0.9803
Human BJ (Normal Human BJ Skin Fibroblasts) 0.7488 0.5000 2 0.9223
Human CACO2 (Colorectal adenocarcinoma) 0.7072 0.5000 2 0.8989
Human CD20 (Human Leukapheresis Product) 0.5716 0.4473 2 0.8980
Human GM04503D (Adherent Fibroblast Strain) 0.6456 0.6228 2 0.9839
Human GM04504A (Adherent Fibroblast Strain) 0.7513 0.7315 2 0.9532
Human GM06990 (GM06990) 0.5463 0.5463 2 0.9794
Human GM12865 (Female B-Lymphocyte Utah Pedigree 1459 Repository Linkage Family) 0.5250 0.5036 2 0.9865
Human GM12878 (Lymphoblastoid cells) 0.5000 0.4428 2 0.8361
Human H7_hESC_T14 (H7 human embryonic stem cells T14) 0.3720 0.3622 2 0.9840
Human H7_hESC_T5 (H7 human embryonic stem cells T5) 0.3431 0.3778 2 0.8399
Human HAc (Human Astrocytes-cerebellar) 0.4222 0.4152 2 0.9578
Human HAEpiC (Human amniotic epithelial cells) 0.7644 0.7512 2 0.9917
Human HAh (Human Astrocytes-hippocampal) 0.4846 0.3093 2 0.9031
Human HAsp (Human Astrocytes-spinal cord) 0.4255 0.3919 2 0.9433
Human HBMEC (Human Brain Microvascular Endothelial Cells) 0.5433 0.4170 2 0.9793
Human HBVSMC (Human Brain Vascular Smooth Muscle Cells) 0.3551 0.3940 2 0.9489
Human HCF (Human Cardiac Fibroblasts) 0.6880 0.6080 2 0.9945
Human HCFaa (Human Cardiac Fibroblasts-Adult Atrial ) 0.5183 0.4809 2 0.9679
Human HCM (Human cardiac myocytes) 0.7207 0.5102 2 0.9845
Human HConF (Human Conjunctival Fibroblasts) 0.5061 0.4838 2 0.9883
Human HCPEpiC (Human Choroid Plexus Epithelial Cells) 0.7418 0.6027 2 0.9854
Human HCT116 (Human Colorectal Carcinoma Cells ) 0.4545 0.4015 2 0.9889
Human HEEpiC (Human esophageal epithelial cells) 0.5693 0.5493 2 0.9719
Human Hela (Cervical carcinoma) 0.5787 0.5816 2 0.9389
Human HepG2 (HepG2) 0.5700 0.5500 2 0.9168
Human hESCT0 (H7 undifferentiated human embryonic stem cells ) 0.6353 0.5687 2 0.9698
Human HFF (Human Foreskin Fibroblast Cells) 0.5451 0.5395 2 0.9751
Human HFF_MyC (Human Foreskin Fibroblast Cells Expressing Canine cMyc) 0.4844 0.4280 2 0.9579
Human HGF (Human Gingival Fibroblasts) 0.4832 0.4821 2 0.9799
Human HIPEpiC (Human iris pigment epithelial cells) 0.5596 0.5400 2 0.9837
Human HL60 (Acute promyelocytic leukemia) 0.5888 0.5883 2 0.9800
Human HMEC (Human Mammary Epithelial Cells) 0.4255 0.4350 2 0.7662
Human HMF (Human Mammary Fibroblasts) 0.7977 0.7499 2 0.9814
Human HMVEC_dAd (Normal Adult Human Microvascular Endothelial Cells, Dermal-Derived) 0.3765 0.2111 2 0.9266
Human HMVEC_dBlAd (Normal Adult Human Blood Microvascular Endothelial Cells, Dermal-Derived) 0.7260 0.7035 2 0.9876
Human HMVEC_dBlNeo (Normal Neonatal Human Blood Microvascular Endothelial Cells, Dermal-Derived) 0.5289 0.4914 2 0.9701
Human HMVEC_dLyAd (Normal Adult Human Lymphatic Microvascular Endothelial Cells, Dermal-Derived) 0.5754 0.6281 2 0.9883
Human HMVEC_dLyNeo (Normal Neonatal Human Lymphatic Microvascular Endothelial Cells, Dermal-Derived) 0.5785 0.5394 2 0.9937
Human HMVEC_dNeo (Normal Neonatal Human Microvascular Endothelial Cells (Single Donor), Dermal-Derived) 0.5856 0.4094 2 0.9864
Human HMVEC_LBl (Normal Human Blood Microvascular Endothelial Cells, Lung-Derived) 0.4847 0.4701 2 0.9603
Human HMVEC_LLy (Normal Human Lymphatic Microvascular Endothelial Cells, Lung-Derived) 0.6046 0.5515 2 0.9903
Human HNPCEpiC (Human Non-pigment Ciliary Epithelial Cells) 0.6053 0.4433 2 0.9417
Human HPAF (Human Pulmonary Artery Fibroblasts) 0.7156 0.7040 2 0.9940
Human HPdLF (Normal Human Periodontal Ligament Fibroblast Cells) 0.6862 0.6071 2 0.9874
Human HPF (Human Pulmonary Fibroblasts) 0.6722 0.5917 2 0.9770
Human HRCE (Human renal cortical epithelial cells ) 0.6573 0.6130 2 0.9817
Human HRE (Human renal epithelial cells) 0.5340 0.4300 2 0.9729
Human HRGEC (Human Renal Glomerular Endothelial Cells) 0.4239 0.3626 2 0.8689
Human HRPEpiC (Human retinal pigment epithelial cells) 0.7414 0.5997 2 0.9820
Human HSMM (Normal Human Skeletal Muscle Myoblasts) 0.6368 0.5802 2 0.9205
Human HSMM_D (Primary Muscle myoblasts and myotubes) 0.4979 0.6013 2 0.8633
Human HUVEC (Primary Human Umbilical Vein Endothelial Cells) 0.4012 0.3225 2 0.8831
Human HVMF (Human Villous Mesenchymal Fibroblast Cells) 0.5905 0.6069 2 0.9220
Human Jurkat (Acute T Cell Leukemia Lymphocyte) 0.4966 0.3938 2 0.9108
Human K562 (Chronic myelogenous leukemia) 0.5415 0.5205 2 0.9846
Human LNCap (Prostate Carcinoma) 0.6198 0.5305 2 0.9747
Mouse m3134 (Mammary Adenocarcinoma Cells) 0.6858 0.3197 2 0.9221
Mouse m416B (416B) 0.5380 0.4745 2 0.9701
Mouse mA20 (Lymphoblasts) 0.4405 0.3792 2 0.9273
Mouse mB (Spleen B cells) 0.4914 0.4845 2 0.9660
Mouse mB (Spleen B cells) 0.4914 0.3893 2 0.9528
Mouse mB (Spleen B cells) 0.4914 0.3703 2 0.8990
Mouse mBrain (WholeBrain) 0.6892 0.4006 2 0.9304
Mouse mBrain (WholeBrain) 0.6892 0.6126 2 0.9524
Mouse mBrain (WholeBrain) 0.6892 0.6071 2 0.9528
Mouse mBrain (WholeBrain) 0.6892 0.5968 2 0.9456
Mouse mBrain (WholeBrain) 0.6892 0.3247 2 0.9222
Mouse mBrain (WholeBrain) 0.6892 0.4058 2 0.9080
Mouse mCD1 (HeadlessEmbryo) 0.3919 0.3497 2 0.9390
Mouse mCD19 (B-cell_(CD19+)) 0.4195 0.3989 2 0.8326
Mouse mCerebellum (Cerebellum) 0.3972 0.5057 2 0.9607
Mouse mCerebellum (Cerebellum) 0.3972 0.3516 2 0.9601
Mouse mCerebellum (Cerebellum) 0.4366 0.4033 2 0.9537
Mouse mCerebrum (Cerebrum) 0.4366 0.4013 2 0.9604
Human MCF7 (Mammary gland adenocarcinoma) 0.4373 0.4356 2 0.9120
Mouse mCJ7 (undifferentiated mouse embryonic stem cells) 0.4266 0.4162 2 0.9585
Mouse MEL (Erythroleukemia, derived from a B-cell lymphoma) 0.5019 0.4666 2 0.9623
Mouse MEL (Erythroleukemia, derived from a B-cell lymphoma) 0.5019 0.4601 2 0.9605
Mouse mFatPad (FatPad) 0.3552 0.3524 2 0.8948
Mouse mfBrain (Fetal) 0.4827 0.3694 2 0.9337
Mouse mfBrain (Fetal) 0.4827 0.4484 2 0.9793
Mouse mFibroblast (Fibroblast) 0.5804 0.5710 2 0.9130
Mouse mForelimbBuds (ForelimbBud) 0.4580 0.3232 2 0.9400
Mouse mGenitalFatPad (GenitalFatPad) 0.4305 0.3995 2 0.9276
Mouse mHeart (Heart) 0.4330 0.4699 2 0.9219
Mouse mHindlimbsBuds (HindlimbBud) 0.3885 0.3008 2 0.7873
Mouse mKidney (Kidney) 0.4511 0.3876 2 0.9520
Mouse mLiver (Liver) 0.4228 0.6782 2 0.9402
Mouse mLiver (Liver) 0.4228 0.5351 2 0.9458
Mouse mLiver (Liver) 0.4228 0.5045 2 0.9515
Mouse mLiver (Liver) 0.4228 0.4173 2 0.8876
Mouse mLiver (Liver) 0.4228 0.6095 2 0.9351
Mouse mLiver (Liver) 0.4228 0.6567 2 0.8966
Mouse mLiver (Liver) 0.4228 0.4479 2 0.9555
Mouse mLiver (Liver) 0.4228 0.7245 2 0.9572
Mouse mLiver (Liver) 0.4228 0.7052 2 0.9640
Mouse mLiver (Liver) 0.4228 0.5404 2 0.9318
Mouse mLiver (Liver) 0.4228 0.6673 2 0.9371
Mouse mLung (Lung) 0.4233 0.3614 2 0.9145
Mouse mLung (Lung) 0.4233 0.4087 2 0.9460
Mouse mMesoderm (Mesoderm) 0.4297 0.4658 2 0.9556
Mouse mMuscle_Skeletal (SkMuscle) 0.3817 0.3430 2 0.9622
Mouse mNIH_3T3 (Embryonic Fibroblasts) 0.4619 0.4202 2 0.8528
Mouse mPATSKI (Mouse Embryonic Kidney Fibroblasts) 0.4042 0.3721 2 0.9377
Mouse mRetina (Retina) 0.4167 0.4841 2 0.9078
Mouse mSpleen (Spleen) 0.5462 0.3612 2 0.9804
Mouse mThymus (Thymus) 0.4699 0.4634 2 0.9657
Mouse mTN (T-Naive) 0.4709 0.4630 2 0.9389
Mouse mTN (T-Naive) 0.4709 0.4567 2 0.8372
Mouse mTN (T-Naive) 0.4709 0.5246 2 0.9386
Mouse mTR (TReg) 0.5595 0.3323 2 0.9339
Human NB4 (Human Acute Promyelocytic Leukemia Cells) 0.5310 0.4814 2 0.9836
Human NHA (Normal Human Astrocytes) 0.5615 0.5075 2 0.9680
Human NHBE_RA (Normal Human Bronchial Epithelial Cells) 0.3443 0.3750 2 0.9370
Human NHDF_Ad (Adult Normal Human Dermal Fibroblasts) 0.8045 0.7754 2 0.9864
Human NHDF_Neo (Neonatal Human Dermal Fibroblasts) 0.6976 0.6705 2 0.9951
Human NHEK (Normal Human Epidermal Keratinocytes) 0.3573 0.3119 2 0.9414
Human NHLF (Normal Human Lung Fibroblast) 0.7064 0.5159 2 0.9808
Human NT2_D1 (Pluripotent human Testicular Embryonic Carcinoma Cell Line) 0.3505 0.3099 2 0.9425
Human PANC1 (Pancreatic Carcinoma) 0.4176 0.4106 2 0.9852
Human PrEC (Prostate Epithelial Cells) 0.3233 0.3087 2 0.9707
Human RPTEC (Renal Proximal Tubule Epithelial Cells) 0.4866 0.4764 2 0.9807
Human SAEC (Small Airway Epithelial Cell) 0.6197 0.4274 2 0.9503
Human SKMC (Skeletal Muscle Cells) 0.8007 0.7460 2 0.9867
Human SKNSH (Neuroblastoma) 0.6218 0.4001 2 0.8561
Human SK_N_MC (Human Brain Neuroepithelioma Cells) 0.3534 0.3382 2 0.9815
Human T_47D (Mammary Ductal Carcinoma) 0.5837 0.5505 2 0.9949
Human WERI_Rb1 (Retinoblastoma) 0.5459 0.3906 2 0.8239
Human WI_38 (Retinoblastoma) 0.6998 0.5744 2 0.9805
Human WI_38_TAM (Retinoblastoma) 0.6215 0.4675 2 0.9716
Mouse ZhBTc4 (Undifferentiated mouse embryonic stem cells ) 0.3864 0.3937 2 0.8571